PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000133918
Common NameWRKY15
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family WRKY
Protein Properties Length: 266aa    MW: 29522 Da    PI: 4.8866
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000133918genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.86.8e-3182140259
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                    +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++++itY+ eHnh+
  MDP0000133918  82 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTMLVITYSAEHNHP 140
                    69*************************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.0E-3274142IPR003657WRKY domain
PROSITE profilePS5081132.71976142IPR003657WRKY domain
SuperFamilySSF1182902.35E-2677142IPR003657WRKY domain
SMARTSM007741.4E-3681141IPR003657WRKY domain
PfamPF031064.6E-2683140IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MDPTFFSSNS KQIMSDQEEN DNTTSSTPEN SSDTPPPSTN FSDYSKITTS TSSPKKSARR  60
AIQKRVVSVP IKNENSNTPP PSDSWAWRKY GQKPIKGSPY PRGYYRCSSS KGCPARKQVE  120
RSRVDPTMLV ITYSAEHNHP WPASRNHNNN RNISNPAAGT KPCPTPEAQQ PDHQDQDQDP  180
RFADLNNESL LVNDEYVWFA DMETTSSTVL ESPXFAESGG SDSGDMAAMV FPMGEEDESL  240
FADLGELPEY SLVFRHRGVG PQAQIC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-19831421674WRKY transcription factor 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.64770.0cell culture| fruit| leaf| root
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00167DAPTransfer from AT1G29280Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU5768740.0GU576874.1 Malus hupehensis WRKY transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001280782.10.0probable WRKY transcription factor 65
SwissprotQ9LP564e-78WRK65_ARATH; Probable WRKY transcription factor 65
TrEMBLD9ZJF40.0D9ZJF4_MALDO; WRKY domain class transcription factor
STRINGPOPTR_0011s06990.14e-91(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27703475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.13e-74WRKY DNA-binding protein 65